BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003D05LP1|AL425112
(910 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1486 1662 0.0
>3x_Contig1486
Length = 12131
Score = 1662 bits (831), Expect = 0.0
Identities = 889/911 (97%), Gaps = 4/911 (0%)
Strand = Plus / Minus
Query: 1 gatctaatgagtttaagtactcaantttaccgaataccattaggagagggccgaatactc 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 11311 gatctaatgagtttaagtactcaa-tttaccgaataccattaggagagggccgaatactc 11253
Query: 61 cttaagtatgatatgtttaaaacttactataacgaaaataaaaaaaatcgaaacttaaat 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11252 cttaagtatgctatgtttaaaacttactataacgaaaataaaaaaaatcgaaacttaaat 11193
Query: 121 aaatacaccagaaacaagatgaaatgaagtagagtagaatttcaagaccaaactggaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11192 aaatacaccagaaacaagatgaaatgaagtagagtagaatttcaagaccaaactggaatg 11133
Query: 181 ggaaggaataaraaagagagggatatgtacttgcaaactaagttccctccggtgtattag 240
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 11132 ggaaggaataaaaaagagagggatatgtacttgcaaactaagttcc-tccggtgtattag 11074
Query: 241 tcttgaactcgaacagaatatcctctaaraggtcataatccttataaratgaggactcgg 300
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 11073 tcttgaactcgaacagaatatcctctaaaaggtcataatccttataaaatgaggactcgg 11014
Query: 301 actttttatctgctttatcctgtcttgattccgtcatctcagcggaattcgtgcttgtga 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 11013 actttttatctgctttatcctgtcttgattccgtcatcttagcggaattcgtgcttgtga 10954
Query: 361 aatttaccagagactcaatggatccatataacggttccataatttctggtaacagtgata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10953 aatttaccagagactcaatggatccatataacggttccataatttctggtaacagtgata 10894
Query: 421 gagtttctagtaatgaggcaatccgtaaagataaatcgccaaaratatacttatctgtat 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 10893 gagtttctagtaatgaggcaatccgtaaagataaatcgccaaaaatatacttatctgtat 10834
Query: 481 taagcactggcgcggrattccagaaccaattgtatcttgacaaaaacgcagatgcaacgg 540
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10833 taagcactggcgcggaattccagaaccaattgtatcttgacaaaaacgcagatgcaacgg 10774
Query: 541 tcctggaatctagttcactcttttgaagttgatatatttkcaactgcaggtatgcttcct 600
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 10773 tcctggaatctagttcactcttttgaagttgatatattttcaactgcaggtatgcttcct 10714
Query: 601 tacttagtgataacaaccctagtggaaatatcacaaacccaaagggaataarataccata 660
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 10713 tacttagtgataacaaccctagtggaaatatcacaaacccaaagggaataaaataccata 10654
Query: 661 caggacgta-tgctttgaaaagtgccactgaacaccaataccttaaaagaatgggataca 719
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10653 caggacgtagtgctttgaaaagtgccactgaacaccaataccttaaaagaatgggataca 10594
Query: 720 tctcagcaatattttgatgaatcgtctccaacgaaatgagtataggcaatgcactcgtca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10593 tctcagcaatattttgatgaatcgtctccaacgaaatgagtataggcaatgcactcgtca 10534
Query: 780 acaaaggtctaaatkartgagaagarttacaatagtaattcttttttctttttggggtag 839
|||||||||||||| | |||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 10533 acaaaggtctaaattaatgagaagaattacaatagtaattcttttttctttttgggttag 10474
Query: 840 ttagacwatgtcagaattagaatggatccaattttttagttgggaatkttattaaggata 899
| |||| ||||||| |||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 10473 taagacaatgtcag-attagaatggatccaattttttagttggaaattttattaaggata 10415
Query: 900 gaggtgaatgc 910
|| ||||||||
Sbjct: 10414 gaagtgaatgc 10404
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6977
Number of Sequences: 1807
Number of extensions: 6977
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 910
length of database: 10,358,551
effective HSP length: 16
effective length of query: 894
effective length of database: 10,329,639
effective search space: 9234697266
effective search space used: 9234697266
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)